I have an image displayed using imshow. Then I add all rows and display the maximum value. I do the same thing with the columns. In the display graph, I want the x-axis and y-axis of the image to coincide with the x-axis of the added columns and the y-axis of the added rows. However, despite setting sharex
and sharey
respectively, it doesn't seem to work. I wish I could only do one at a time:
import numpy as np import matplotlib.pyplot as plt from scipy.signal import argrelextrema import matplotlib.animation as animation fig= plt.figure() gs= fig.add_gridspec(2,2, height_ratios=[1, 0.1], width_ratios=[1, 0.1], hspace=0, wspace=0) ax1= fig.add_subplot(gs[0,0]) ax2= fig.add_subplot(gs[1,0], sharex=ax1) ax3= fig.add_subplot(gs[0,1], sharey=ax1) frameNumber= 10 imgs= [] for i in range(frameNumber): np.random.seed(i) randomImage= np.random.random((5,5)) sumX= np.sum(randomImage, axis=0) sumY= np.sum(randomImage, axis=1) dataRange= np.arange(len(sumX)) randomDataSet= np.random.random((10)) randomMaximalX= argrelextrema(sumX, np.greater) randomMaximalY= argrelextrema(sumY, np.greater) img1= ax1.imshow(randomImage, animated=True) img2= ax2.plot(dataRange, sumX,animated=True)[0] img3= ax3.plot(sumY,dataRange,animated=True)[0] img4= ax2.vlines(x=randomMaximalX, ymin=0, ymax=5, animated=True, linestyles="dashed") img5= ax3.hlines(y=randomMaximalY, xmin=0, xmax=5, animated=True, linestyles="dashed") imgs.append([img1, img2, img3, img4, img5]) ani= animation.ArtistAnimation(fig, imgs, interval=1000, blit=False) plt.show()
The current result is this:
Actually I want something like this:
The h values of the two graphs are the same. Thank you so much!
Correct answer
There are two ways to solve this problem:
- Use
axes.pcolormesh
instead ofaxes.imshow
- Or update the aspect ratio of adjacent images.
① axis.pcolormesh
axes.pcolormesh
does not force the resulting image to be square (1:1 aspect ratio), so your cells will be rectangular, but they will fill the space provided appropriately.
from numpy.random import default_rng import matplotlib.pyplot as plt rng = default_rng(0) image = rng.uniform(1, 10, size=(5, 5)) mosaic = [ ['main', 'right'], ['bottom', '.' ], ] fig, axd = plt.subplot_mosaic( mosaic, gridspec_kw={ 'height_ratios': [1, .1], 'width_ratios': [1, .1], 'wspace': .05, 'hspace': .05, }, sharex=true, sharey=true, ) axd['main'].pcolormesh(image) plt.show()
② Update
If you want to stick with axes.imshow
then you need to adjust
Manually adjust the aspect ratio of each plot. To get the correct ratio you need
Calculated based on height_ratio
and width_ratio
provided to gridspec
from numpy.random import default_rng import matplotlib.pyplot as plt rng = default_rng(0) image = rng.uniform(1, 10, size=(5, 5)) mosaic = [ ['main', 'right'], ['bottom', '.' ], ] fig, axd = plt.subplot_mosaic( mosaic, sharex=True, sharey=True, gridspec_kw={ 'height_ratios': [1, .1], 'width_ratios': [1, .1], # change values to move adjacent plots closer to the main 'wspace': .05, 'hspace': .05, }, ) axd['main'].imshow(image) axd['main'].set_anchor('SE') # move main plot to bottom-right of bounding-box # calculate the width and height scales gs = axd['main'].get_gridspec() # you can also save these values from your `gridspec_kw` width_scale = gs.get_width_ratios()[0] / gs.get_width_ratios()[1] height_scale = gs.get_height_ratios()[0] / gs.get_height_ratios()[1] # update the aspect ratios of the adjacent plots # set their anchors so they correctly align with the main plot axd['right'].set_aspect(width_scale, anchor='SW') axd['bottom'].set_aspect(1/height_scale, anchor='NE') plt.show()
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