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Understanding SettingWithCopyWarning in Pandas
Introduction
Upon upgrading to Pandas 0.13.0rc1, you may encounter a new warning, the SettingWithCopyWarning. This warning serves to alert you about potential issues when modifying a copy of a DataFrame slice instead of the original DataFrame itself.
Causes of the Warning
The warning is triggered when values are assigned to a slice of a DataFrame that was previously created as a copy. For instance, consider the following code:
quote_df = pd.read_csv(StringIO(str_of_all), sep=',', names=list('ABCDEFGHIJKLMNOPQRSTUVWXYZabcdefg')) quote_df['TVol'] = quote_df['TVol']/TVOL_SCALE
In this code, the quote_df variable is initially created as a copy of the original DataFrame. Assigning a new value to the 'TVol' column in quote_df triggers the SettingWithCopyWarning because the changes are not propagated back to the original DataFrame.
Consequences of Ignoring the Warning
Ignoring the warning can lead to unexpected behavior and inconsistencies in your data manipulations.
Recommended Approach
To avoid the warning and ensure proper data manipulation, you should use the .loc accessor to modify values directly in the original DataFrame. The following code rewrites the example above using the .loc accessor:
quote_df.loc[:, 'TVol'] = quote_df['TVol']/TVOL_SCALE
By using .loc, you ensure that the changes are applied to the original DataFrame instead of a copy.
Disabling the Warning
If you are confident that the chained assignment is intended and does not lead to any issues, you can disable the SettingWithCopyWarning using the following code:
import pandas as pd pd.options.mode.chained_assignment = None # default='warn'
However, it is generally recommended to address the underlying issue causing the warning rather than disabling it.
Conclusion
The SettingWithCopyWarning provides valuable feedback to help you identify potential errors in your data manipulation code. By understanding the causes and consequences of this warning, you can ensure that your code behaves as intended and avoids any data integrity issues.
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