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Efficient Frequency Counting for Unique Values in NumPy Arrays
For efficient frequency counting of unique values in a NumPy array, consider utilizing numpy.unique with the return_counts=True option, especially for NumPy versions 1.9 and above. This approach provides both unique values and their respective counts.
<code class="python">import numpy as np x = np.array([1,1,1,2,2,2,5,25,1,1]) unique, counts = np.unique(x, return_counts=True) print(np.asarray((unique, counts)).T) # Output in tuple format</code>
This approach surpasses scipy.stats.itemfreq in terms of efficiency, as demonstrated below:
<code class="python">x = np.random.random_integers(0,100,1e6) %timeit unique, counts = np.unique(x, return_counts=True) # 31.5 ms %timeit scipy.stats.itemfreq(x) # 170 ms</code>
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